Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GABREP78334 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
GABREP78334 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.53□□□□□ -0.24
GABREP78334 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABREP78334 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
GABREP78334 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 AL137784.3-201ENST00000623858 2288 ntBASIC13.52□□□□□ -0.24
GABREP78334 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABREP78334 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
GABREP78334 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
GABREP78334 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
GABREP78334 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
GABREP78334 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.52□□□□□ -0.25
GABREP78334 AC026470.1-201ENST00000478038 846 ntBASIC13.52□□□□□ -0.25
GABREP78334 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.52□□□□□ -0.25
GABREP78334 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.52□□□□□ -0.25
GABREP78334 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.52□□□□□ -0.25
GABREP78334 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC13.52□□□□□ -0.25
GABREP78334 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.52□□□□□ -0.25
GABREP78334 AC005586.2-201ENST00000563946 837 ntBASIC13.52□□□□□ -0.25
GABREP78334 AP005264.5-201ENST00000590066 467 ntBASIC13.52□□□□□ -0.25
GABREP78334 AL359091.4-201ENST00000610052 409 ntBASIC13.52□□□□□ -0.25
GABREP78334 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
GABREP78334 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.52□□□□□ -0.25
GABREP78334 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.52□□□□□ -0.25
GABREP78334 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.52□□□□□ -0.25
GABREP78334 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.52□□□□□ -0.25
GABREP78334 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
GABREP78334 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
GABREP78334 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.52□□□□□ -0.25
GABREP78334 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.52□□□□□ -0.25
GABREP78334 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.52□□□□□ -0.25
GABREP78334 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.52□□□□□ -0.25
GABREP78334 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.52□□□□□ -0.25
GABREP78334 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
GABREP78334 CICP14-201ENST00000629111 2732 ntBASIC13.52□□□□□ -0.25
GABREP78334 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.52□□□□□ -0.25
GABREP78334 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GABREP78334 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
GABREP78334 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.51□□□□□ -0.25
GABREP78334 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
GABREP78334 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
GABREP78334 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.51□□□□□ -0.25
GABREP78334 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GABREP78334 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GABREP78334 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms