Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 FAM220BP-201ENST00000377689 816 ntBASIC10.66□□□□□ -0.7
HIST1H2BCP62807 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 LAGE3P1-201ENST00000425356 484 ntBASIC10.66□□□□□ -0.7
HIST1H2BCP62807 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 GLI3-203ENST00000437480 451 ntTSL 2 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 CIB2-208ENST00000560618 804 ntTSL 2 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 AC103988.2-201ENST00000561804 725 ntBASIC10.66□□□□□ -0.7
HIST1H2BCP62807 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
HIST1H2BCP62807 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AC016734.2-201ENST00000624325 1377 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AC073621.1-201ENST00000392730 636 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 NUS1P2-201ENST00000417358 873 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 TSPY19P-201ENST00000418461 509 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 TSPY18P-201ENST00000441642 509 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 BX276092.5-203ENST00000456199 560 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AC136632.2-201ENST00000512891 861 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 SART3-203ENST00000546611 1184 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 TPSP2-201ENST00000561760 610 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AC074051.2-201ENST00000565115 352 ntBASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC10.65□□□□□ -0.7
HIST1H2BCP62807 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms