Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.62□□□□□ -0.39
SEC61A1P61619 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 YBX1P6-201ENST00000442962 1002 ntBASIC12.62□□□□□ -0.39
SEC61A1P61619 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.62□□□□□ -0.39
SEC61A1P61619 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.62□□□□□ -0.39
SEC61A1P61619 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.62□□□□□ -0.39
SEC61A1P61619 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.62□□□□□ -0.39
SEC61A1P61619 AC132938.4-201ENST00000623835 848 ntBASIC12.62□□□□□ -0.39
SEC61A1P61619 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SEC61A1P61619 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SEC61A1P61619 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SEC61A1P61619 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61A1P61619 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SEC61A1P61619 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SEC61A1P61619 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SEC61A1P61619 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
SEC61A1P61619 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SEC61A1P61619 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.61□□□□□ -0.39
SEC61A1P61619 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 FAM86MP-201ENST00000340703 885 ntBASIC12.61□□□□□ -0.39
SEC61A1P61619 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SEC61A1P61619 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
SEC61A1P61619 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.61□□□□□ -0.39
SEC61A1P61619 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 AC092658.1-201ENST00000505836 891 ntBASIC12.61□□□□□ -0.39
SEC61A1P61619 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 AC079316.1-201ENST00000548397 411 ntBASIC12.61□□□□□ -0.39
SEC61A1P61619 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.61□□□□□ -0.39
SEC61A1P61619 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.61□□□□□ -0.39
SEC61A1P61619 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.61□□□□□ -0.39
SEC61A1P61619 AC010328.2-201ENST00000597698 1111 ntBASIC12.61□□□□□ -0.39
SEC61A1P61619 AC004466.1-201ENST00000599515 1080 ntBASIC12.61□□□□□ -0.39
SEC61A1P61619 MIR6799-201ENST00000620297 69 ntBASIC12.61□□□□□ -0.39
SEC61A1P61619 AC008687.7-202ENST00000637404 953 ntBASIC12.61□□□□□ -0.39
SEC61A1P61619 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC61A1P61619 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 MEX3B-202ENST00000558133 4333 ntBASIC12.61□□□□□ -0.39
SEC61A1P61619 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.61□□□□□ -0.39
SEC61A1P61619 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 AL354989.2-201ENST00000435838 1540 ntBASIC12.61□□□□□ -0.39
SEC61A1P61619 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC61A1P61619 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC61A1P61619 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.61□□□□□ -0.39
SEC61A1P61619 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SEC61A1P61619 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SEC61A1P61619 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms