Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PDE6BP35913 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6BP35913 AC006486.2-201ENST00000624246 2199 ntBASIC17.33■□□□□ 0.37
PDE6BP35913 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.33■□□□□ 0.37
PDE6BP35913 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
PDE6BP35913 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6BP35913 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6BP35913 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6BP35913 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6BP35913 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6BP35913 WASH7P-201ENST00000488147 1351 ntBASIC17.33■□□□□ 0.36
PDE6BP35913 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6BP35913 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6BP35913 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6BP35913 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE6BP35913 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PDE6BP35913 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
PDE6BP35913 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.33■□□□□ 0.36
PDE6BP35913 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6BP35913 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.33■□□□□ 0.36
PDE6BP35913 KRT8P30-201ENST00000432100 650 ntBASIC17.33■□□□□ 0.36
PDE6BP35913 EEF1DP2-201ENST00000433698 843 ntBASIC17.33■□□□□ 0.36
PDE6BP35913 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC17.33■□□□□ 0.36
PDE6BP35913 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.33■□□□□ 0.36
PDE6BP35913 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.33■□□□□ 0.36
PDE6BP35913 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6BP35913 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDE6BP35913 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6BP35913 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.33■□□□□ 0.36
PDE6BP35913 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PDE6BP35913 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6BP35913 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDE6BP35913 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6BP35913 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE6BP35913 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PDE6BP35913 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PDE6BP35913 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6BP35913 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6BP35913 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
PDE6BP35913 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDE6BP35913 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PDE6BP35913 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6BP35913 AL139158.3-201ENST00000641212 1562 ntBASIC17.32■□□□□ 0.36
PDE6BP35913 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 AC011498.7-201ENST00000624986 2027 ntBASIC17.32■□□□□ 0.36
PDE6BP35913 AC020931.1-201ENST00000589622 1346 ntBASIC17.32■□□□□ 0.36
PDE6BP35913 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6BP35913 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PDE6BP35913 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 AC004522.1-201ENST00000419978 654 ntBASIC17.32■□□□□ 0.36
PDE6BP35913 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6BP35913 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDE6BP35913 GULOP-201ENST00000454030 748 ntBASIC17.32■□□□□ 0.36
PDE6BP35913 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6BP35913 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.32■□□□□ 0.36
PDE6BP35913 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.32■□□□□ 0.36
PDE6BP35913 AC022447.6-201ENST00000515522 438 ntBASIC17.32■□□□□ 0.36
PDE6BP35913 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6BP35913 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.32■□□□□ 0.36
PDE6BP35913 MIR4254-201ENST00000581063 76 ntBASIC17.32■□□□□ 0.36
PDE6BP35913 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDE6BP35913 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6BP35913 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDE6BP35913 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PDE6BP35913 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6BP35913 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDE6BP35913 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.32■□□□□ 0.36
PDE6BP35913 AC008536.3-201ENST00000623282 1599 ntBASIC17.32■□□□□ 0.36
PDE6BP35913 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.32■□□□□ 0.36
PDE6BP35913 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6BP35913 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PDE6BP35913 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PDE6BP35913 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC17.31■□□□□ 0.36
PDE6BP35913 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.31■□□□□ 0.36
PDE6BP35913 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.31■□□□□ 0.36
PDE6BP35913 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDE6BP35913 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms