Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXD12P35452 AC087386.2-201ENST00000623212 4637 ntBASIC14.32□□□□□ -0.12
HOXD12P35452 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXD12P35452 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HOXD12P35452 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
HOXD12P35452 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXD12P35452 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 AC126365.1-201ENST00000578585 1514 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HOXD12P35452 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXD12P35452 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HOXD12P35452 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXD12P35452 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HOXD12P35452 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXD12P35452 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXD12P35452 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.31□□□□□ -0.12
HOXD12P35452 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXD12P35452 ERP29P1-201ENST00000442902 706 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 AC018638.5-201ENST00000450885 754 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.31□□□□□ -0.12
HOXD12P35452 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXD12P35452 AC084752.1-201ENST00000509766 622 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 CR383656.3-201ENST00000551315 183 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 MIR2392-201ENST00000584881 84 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
HOXD12P35452 AL591471.1-201ENST00000621855 229 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 TEKT4P2-202ENST00000559466 1312 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXD12P35452 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXD12P35452 AC092135.3-201ENST00000624151 1846 ntBASIC14.31□□□□□ -0.12
HOXD12P35452 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXD12P35452 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HOXD12P35452 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HOXD12P35452 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HOXD12P35452 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXD12P35452 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXD12P35452 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXD12P35452 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXD12P35452 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HOXD12P35452 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HOXD12P35452 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.3□□□□□ -0.12
HOXD12P35452 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXD12P35452 ST13P19-201ENST00000442505 1124 ntBASIC14.3□□□□□ -0.12
HOXD12P35452 AC098934.1-203ENST00000442868 1262 ntBASIC14.3□□□□□ -0.12
HOXD12P35452 RPL35P9-201ENST00000446059 350 ntBASIC14.3□□□□□ -0.12
HOXD12P35452 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HOXD12P35452 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.3□□□□□ -0.12
HOXD12P35452 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 AC073592.2-201ENST00000623062 780 ntBASIC14.3□□□□□ -0.12
HOXD12P35452 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXD12P35452 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXD12P35452 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXD12P35452 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXD12P35452 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms