Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 RPL13AP3-202ENST00000494676 1473 ntBASIC12.28□□□□□ -0.44
CD40P25942 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.28□□□□□ -0.44
CD40P25942 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 BX679664.3-201ENST00000414070 555 ntBASIC12.28□□□□□ -0.44
CD40P25942 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.28□□□□□ -0.44
CD40P25942 AC113935.1-201ENST00000471722 555 ntBASIC12.28□□□□□ -0.44
CD40P25942 ORAOV1P1-201ENST00000503108 395 ntBASIC12.28□□□□□ -0.44
CD40P25942 CHCHD2P2-201ENST00000503744 321 ntBASIC12.28□□□□□ -0.44
CD40P25942 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.28□□□□□ -0.44
CD40P25942 RN7SL665P-201ENST00000578793 300 ntBASIC12.28□□□□□ -0.44
CD40P25942 SIGLEC22P-201ENST00000599104 714 ntBASIC12.28□□□□□ -0.44
CD40P25942 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.28□□□□□ -0.44
CD40P25942 AC007881.3-201ENST00000608897 607 ntBASIC12.28□□□□□ -0.44
CD40P25942 AL021707.6-201ENST00000609212 491 ntBASIC12.28□□□□□ -0.44
CD40P25942 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 AL590824.1-201ENST00000403828 1349 ntBASIC12.28□□□□□ -0.44
CD40P25942 TUBB8P4-201ENST00000511806 1324 ntBASIC12.28□□□□□ -0.44
CD40P25942 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 AC067931.2-201ENST00000623655 2003 ntBASIC12.28□□□□□ -0.44
CD40P25942 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CD40P25942 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.28□□□□□ -0.44
CD40P25942 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD40P25942 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.27□□□□□ -0.44
CD40P25942 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD40P25942 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.27□□□□□ -0.44
CD40P25942 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CD40P25942 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.27□□□□□ -0.44
CD40P25942 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.27□□□□□ -0.44
CD40P25942 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CD40P25942 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.27□□□□□ -0.44
CD40P25942 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD40P25942 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD40P25942 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CD40P25942 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CD40P25942 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CD40P25942 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD40P25942 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD40P25942 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD40P25942 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CD40P25942 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD40P25942 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.27□□□□□ -0.45
CD40P25942 AL512306.1-201ENST00000432698 848 ntBASIC12.27□□□□□ -0.45
CD40P25942 AC098934.1-203ENST00000442868 1262 ntBASIC12.27□□□□□ -0.45
CD40P25942 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.27□□□□□ -0.45
CD40P25942 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.27□□□□□ -0.45
CD40P25942 AC008267.1-201ENST00000474858 1069 ntBASIC12.27□□□□□ -0.45
CD40P25942 MRPL22P1-201ENST00000505398 616 ntBASIC12.27□□□□□ -0.45
CD40P25942 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms