Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.57□□□□□ -0.4
RAB3BP20337 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.57□□□□□ -0.4
RAB3BP20337 CR392039.2-201ENST00000623182 509 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RAB3BP20337 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
RAB3BP20337 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB3BP20337 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 AP001972.5-201ENST00000624624 2338 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 FKBP4P6-201ENST00000457486 1332 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB3BP20337 AC115284.2-201ENST00000624646 2054 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB3BP20337 MSNP1-201ENST00000511640 1732 ntBASIC12.57□□□□□ -0.4
RAB3BP20337 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB3BP20337 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB3BP20337 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB3BP20337 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
RAB3BP20337 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB3BP20337 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 AC060814.4-201ENST00000594169 2163 ntBASIC12.56□□□□□ -0.4
RAB3BP20337 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 LINC01165-201ENST00000445190 1623 ntBASIC12.56□□□□□ -0.4
RAB3BP20337 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 AL022342.1-201ENST00000400363 863 ntBASIC12.56□□□□□ -0.4
RAB3BP20337 MEP1AP4-201ENST00000423244 1087 ntBASIC12.56□□□□□ -0.4
RAB3BP20337 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 AC104596.2-201ENST00000512793 793 ntBASIC12.56□□□□□ -0.4
RAB3BP20337 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.56□□□□□ -0.4
RAB3BP20337 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB3BP20337 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 AC025678.2-201ENST00000562061 970 ntBASIC12.56□□□□□ -0.4
RAB3BP20337 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
RAB3BP20337 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB3BP20337 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB3BP20337 AC015911.4-201ENST00000588022 1070 ntBASIC12.56□□□□□ -0.4
RAB3BP20337 AC008738.7-201ENST00000609744 511 ntBASIC12.56□□□□□ -0.4
RAB3BP20337 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB3BP20337 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB3BP20337 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB3BP20337 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB3BP20337 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB3BP20337 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB3BP20337 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RAB3BP20337 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB3BP20337 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RAB3BP20337 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB3BP20337 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RAB3BP20337 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB3BP20337 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms