Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL5A2P05997 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL5A2P05997 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL5A2P05997 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
COL5A2P05997 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC18.14■□□□□ 0.5
COL5A2P05997 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC18.14■□□□□ 0.5
COL5A2P05997 SNORA47-201ENST00000458862 138 ntBASIC18.14■□□□□ 0.5
COL5A2P05997 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC18.14■□□□□ 0.5
COL5A2P05997 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.14■□□□□ 0.5
COL5A2P05997 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC18.14■□□□□ 0.5
COL5A2P05997 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC18.14■□□□□ 0.5
COL5A2P05997 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC18.14■□□□□ 0.5
COL5A2P05997 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC18.14■□□□□ 0.5
COL5A2P05997 AC139100.2-201ENST00000616901 662 ntBASIC18.14■□□□□ 0.5
COL5A2P05997 AC008622.3-201ENST00000621170 600 ntBASIC18.14■□□□□ 0.5
COL5A2P05997 SNORA50D-202ENST00000627561 132 ntBASIC18.14■□□□□ 0.5
COL5A2P05997 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC18.14■□□□□ 0.5
COL5A2P05997 AL590556.2-202ENST00000636906 844 ntBASIC18.14■□□□□ 0.5
COL5A2P05997 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC18.14■□□□□ 0.49
COL5A2P05997 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC18.14■□□□□ 0.49
COL5A2P05997 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 AC126177.1-201ENST00000547829 2218 ntBASIC18.14■□□□□ 0.49
COL5A2P05997 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL5A2P05997 KRT8P6-201ENST00000399259 1207 ntBASIC18.14■□□□□ 0.49
COL5A2P05997 ASS1P1-201ENST00000402854 1237 ntBASIC18.14■□□□□ 0.49
COL5A2P05997 RBM14-205ENST00000443702 732 ntTSL 3 BASIC18.14■□□□□ 0.49
COL5A2P05997 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
COL5A2P05997 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC18.14■□□□□ 0.49
COL5A2P05997 EMP3-204ENST00000596315 761 ntTSL 2 BASIC18.14■□□□□ 0.49
COL5A2P05997 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL5A2P05997 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC18.13■□□□□ 0.49
COL5A2P05997 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.13■□□□□ 0.49
COL5A2P05997 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 AC040160.2-201ENST00000623816 1675 ntBASIC18.13■□□□□ 0.49
COL5A2P05997 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 TUBB2BP1-201ENST00000404155 871 ntBASIC18.13■□□□□ 0.49
COL5A2P05997 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC18.13■□□□□ 0.49
COL5A2P05997 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC18.13■□□□□ 0.49
COL5A2P05997 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC18.13■□□□□ 0.49
COL5A2P05997 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COL5A2P05997 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC18.13■□□□□ 0.49
COL5A2P05997 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC18.13■□□□□ 0.49
COL5A2P05997 MTHFD2P7-201ENST00000483867 983 ntBASIC18.13■□□□□ 0.49
COL5A2P05997 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC18.13■□□□□ 0.49
COL5A2P05997 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC18.13■□□□□ 0.49
COL5A2P05997 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COL5A2P05997 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC18.13■□□□□ 0.49
COL5A2P05997 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC18.13■□□□□ 0.49
COL5A2P05997 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC18.13■□□□□ 0.49
COL5A2P05997 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COL5A2P05997 PSME2-217ENST00000615264 874 ntTSL 5 BASIC18.13■□□□□ 0.49
COL5A2P05997 AL512324.3-201ENST00000619383 882 ntBASIC18.13■□□□□ 0.49
COL5A2P05997 PSME2-218ENST00000630027 185 ntTSL 3 BASIC18.13■□□□□ 0.49
COL5A2P05997 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COL5A2P05997 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COL5A2P05997 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL5A2P05997 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.12■□□□□ 0.49
COL5A2P05997 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL5A2P05997 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
COL5A2P05997 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.12■□□□□ 0.49
COL5A2P05997 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC18.12■□□□□ 0.49
COL5A2P05997 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.12■□□□□ 0.49
COL5A2P05997 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL5A2P05997 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 RCC2P5-201ENST00000492126 1487 ntBASIC18.12■□□□□ 0.49
COL5A2P05997 AC020910.6-201ENST00000623084 1459 ntBASIC18.12■□□□□ 0.49
COL5A2P05997 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL5A2P05997 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC18.12■□□□□ 0.49
COL5A2P05997 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC18.12■□□□□ 0.49
COL5A2P05997 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC18.12■□□□□ 0.49
COL5A2P05997 AC022447.5-201ENST00000504817 392 ntBASIC18.12■□□□□ 0.49
COL5A2P05997 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms