Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 FAM90A7P-201ENST00000382628 1395 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 FAM90A23P-201ENST00000400136 1395 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.29□□□□□ -0.6
TRGV3P03979 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
TRGV3P03979 AC018629.1-201ENST00000623381 1736 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TRGV3P03979 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TRGV3P03979 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TRGV3P03979 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
TRGV3P03979 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 DPM3-202ENST00000368399 517 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.29□□□□□ -0.6
TRGV3P03979 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TRGV3P03979 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC11.29□□□□□ -0.6
TRGV3P03979 FADS2-212ENST00000522639 360 ntTSL 5 BASIC11.29□□□□□ -0.6
TRGV3P03979 PGAM1P5-201ENST00000548011 764 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 AC140658.4-201ENST00000561990 352 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 SYT17-208ENST00000568433 812 ntTSL 3 BASIC11.29□□□□□ -0.6
TRGV3P03979 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11.29□□□□□ -0.6
TRGV3P03979 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC11.29□□□□□ -0.6
TRGV3P03979 AC138649.2-201ENST00000615886 705 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
TRGV3P03979 MIR6799-201ENST00000620297 69 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 AC092299.1-201ENST00000632679 757 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
TRGV3P03979 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TRGV3P03979 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
TRGV3P03979 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.29□□□□□ -0.6
TRGV3P03979 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV3P03979 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 PTPRVP-205ENST00000641549 5067 ntBASIC11.29□□□□□ -0.6
TRGV3P03979 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV3P03979 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV3P03979 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
TRGV3P03979 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TRGV3P03979 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TRGV3P03979 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TRGV3P03979 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TRGV3P03979 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV3P03979 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV3P03979 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV3P03979 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV3P03979 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV3P03979 CSH2-202ENST00000345366 598 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms