Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX2-2O95096 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NKX2-2O95096 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NKX2-2O95096 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NKX2-2O95096 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NKX2-2O95096 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NKX2-2O95096 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
NKX2-2O95096 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NKX2-2O95096 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX2-2O95096 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.12□□□□□ -0.31
NKX2-2O95096 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 OR8T1P-201ENST00000421347 918 ntBASIC13.12□□□□□ -0.31
NKX2-2O95096 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX2-2O95096 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX2-2O95096 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX2-2O95096 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
NKX2-2O95096 KRT8P1-201ENST00000557533 1207 ntBASIC13.12□□□□□ -0.31
NKX2-2O95096 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX2-2O95096 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
NKX2-2O95096 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.12□□□□□ -0.31
NKX2-2O95096 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NKX2-2O95096 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 AC073548.1-201ENST00000624088 1882 ntBASIC13.12□□□□□ -0.31
NKX2-2O95096 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NKX2-2O95096 FRMPD2B-201ENST00000431305 1347 ntBASIC13.12□□□□□ -0.31
NKX2-2O95096 CICP4-201ENST00000447359 2812 ntBASIC13.12□□□□□ -0.31
NKX2-2O95096 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-2O95096 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-2O95096 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-2O95096 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-2O95096 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-2O95096 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX2-2O95096 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-2O95096 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-2O95096 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.11□□□□□ -0.31
NKX2-2O95096 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 MIR1247-201ENST00000408206 136 ntBASIC13.11□□□□□ -0.31
NKX2-2O95096 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-2O95096 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX2-2O95096 BX284668.4-201ENST00000453917 508 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms