Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 ERG-211ENST00000453032 1595 ntTSL 2 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 RPL14-203ENST00000416518 812 ntTSL 3 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 AC020931.1-201ENST00000589622 1346 ntBASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHANK2Q9UPX8 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 AC103702.1-201ENST00000548801 2630 ntBASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 KRT18P33-201ENST00000398525 1043 ntBASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 RNA5SP420-201ENST00000516997 137 ntBASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 AC078814.4-201ENST00000546650 327 ntBASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 AC137723.2-201ENST00000623540 398 ntBASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SHANK2Q9UPX8 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 IGKV1OR-2-201ENST00000457995 350 ntBASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 AC079414.2-201ENST00000567157 1104 ntBASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 AL591424.3-201ENST00000614278 872 ntBASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 MEP1AP1-201ENST00000636082 1097 ntBASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHANK2Q9UPX8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SHANK2Q9UPX8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC20.51■□□□□ 0.87
SHANK2Q9UPX8 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms