Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 AC027237.1-201ENST00000560942 655 ntBASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 AL773604.1-201ENST00000617417 272 ntBASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 FAM197Y3-203ENST00000618346 717 ntBASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 AL357140.3-201ENST00000639753 1983 ntBASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 AC009549.1-201ENST00000603468 1686 ntBASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 EIF3FP3-201ENST00000434851 1086 ntBASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 AL589739.1-201ENST00000607720 493 ntBASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 AL109936.8-201ENST00000641772 604 ntBASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 AC099521.2-201ENST00000619354 2036 ntBASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX1-2Q9UD57 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms