Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 SNORA50C-201ENST00000408535 133 ntBASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 BX284668.4-201ENST00000453917 508 ntBASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 AC020914.3-201ENST00000594712 304 ntBASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 SNORA50.1-201ENST00000628590 135 ntBASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 AC244452.3-201ENST00000636814 210 ntBASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 AC025183.3-201ENST00000623526 1482 ntBASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 SALL4P6-201ENST00000429385 1691 ntBASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 AL157791.1-201ENST00000553667 1699 ntBASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 AC068760.1-201ENST00000493579 1953 ntBASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KLHL42Q9P2K6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 ABCD1P2-201ENST00000429313 1601 ntBASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 KRT8P13-201ENST00000463294 1010 ntBASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 RN7SL455P-201ENST00000580629 282 ntBASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 AC138028.6-201ENST00000616106 1482 ntBASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KLHL42Q9P2K6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms