Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 FNTAP2-201ENST00000430308 634 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 KLF2P1-201ENST00000447438 1042 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 AC104073.2-201ENST00000453737 312 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 TMEM198B-204ENST00000484016 896 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 MARK2P5-201ENST00000507649 634 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 AL160314.3-201ENST00000556041 767 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 AC005962.1-201ENST00000584100 773 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 FAM90A12P-201ENST00000519497 2375 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 FAM90A24P-201ENST00000520792 2369 ntBASIC13.42□□□□□ -0.26
CNIH4Q9P003 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.42□□□□□ -0.26
CNIH4Q9P003 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CNIH4Q9P003 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 AC090643.2-201ENST00000623442 2029 ntBASIC13.41□□□□□ -0.26
CNIH4Q9P003 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.41□□□□□ -0.26
CNIH4Q9P003 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 HLA-J-204ENST00000495278 958 ntBASIC13.41□□□□□ -0.26
CNIH4Q9P003 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 NDUFV2P1-201ENST00000596415 907 ntBASIC13.41□□□□□ -0.26
CNIH4Q9P003 AL132994.2-201ENST00000603120 687 ntBASIC13.41□□□□□ -0.26
CNIH4Q9P003 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CNIH4Q9P003 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CNIH4Q9P003 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms