Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AC011742.3-201ENST00000439053 820 ntBASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 VDAC1P1-201ENST00000439229 848 ntBASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 EIF4HP1-201ENST00000453115 687 ntBASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 SNORD3B-2-202ENST00000571722 791 ntBASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AL132994.2-201ENST00000603120 687 ntBASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AC100757.4-201ENST00000626934 759 ntBASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AC020907.1-201ENST00000616460 1350 ntBASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AP001267.2-201ENST00000532619 2086 ntBASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AC018735.1-201ENST00000437208 1502 ntBASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 FAM90A7P-201ENST00000382628 1395 ntBASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 FAM90A23P-201ENST00000400136 1395 ntBASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 AC078875.1-201ENST00000431907 724 ntBASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 MARK2P5-201ENST00000507649 634 ntBASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 AC044849.1-201ENST00000519737 1188 ntBASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 MIR4525-201ENST00000580000 75 ntBASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 AC104506.1-201ENST00000609247 429 ntBASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 AC136759.1-202ENST00000530858 2194 ntBASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms