Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 AC105424.1-201ENST00000514583 209 ntBASIC12.86□□□□□ -0.35
CHD8Q9HCK8 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 AL356740.1-201ENST00000602192 1297 ntBASIC12.86□□□□□ -0.35
CHD8Q9HCK8 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 MIR4726-201ENST00000615971 58 ntBASIC12.86□□□□□ -0.35
CHD8Q9HCK8 BIN3-212ENST00000640731 450 ntTSL 5 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 AC034205.3-201ENST00000603595 1376 ntBASIC12.86□□□□□ -0.35
CHD8Q9HCK8 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CHD8Q9HCK8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 AL049792.1-201ENST00000424708 1262 ntBASIC12.85□□□□□ -0.35
CHD8Q9HCK8 AC116347.1-201ENST00000442824 720 ntBASIC12.85□□□□□ -0.35
CHD8Q9HCK8 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 AC112693.3-201ENST00000624819 1983 ntBASIC12.85□□□□□ -0.35
CHD8Q9HCK8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 SERF2-205ENST00000403425 690 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 AC079944.2-201ENST00000478867 734 ntBASIC12.85□□□□□ -0.35
CHD8Q9HCK8 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 Z82244.1-201ENST00000631502 840 ntBASIC12.85□□□□□ -0.35
CHD8Q9HCK8 PIGA-209ENST00000634582 965 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 AC087481.3-201ENST00000602886 1894 ntBASIC12.85□□□□□ -0.35
CHD8Q9HCK8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 PCDHA14-201ENST00000506751 2298 ntBASIC12.85□□□□□ -0.35
CHD8Q9HCK8 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 TCAF2P1-201ENST00000291129 2421 ntBASIC12.85□□□□□ -0.35
CHD8Q9HCK8 PCDHA1-201ENST00000378133 2726 ntBASIC12.85□□□□□ -0.35
CHD8Q9HCK8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC12.85□□□□□ -0.35
CHD8Q9HCK8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 OR2A15P-201ENST00000463814 900 ntBASIC12.84□□□□□ -0.35
CHD8Q9HCK8 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 AC090825.2-201ENST00000557959 739 ntBASIC12.84□□□□□ -0.35
CHD8Q9HCK8 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.84□□□□□ -0.35
CHD8Q9HCK8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms