Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 AP002761.4-201ENST00000565433 3361 ntBASIC17.6■□□□□ 0.41
UPF2Q9HAU5 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 MRPS18AP1-201ENST00000414458 589 ntBASIC17.6■□□□□ 0.41
UPF2Q9HAU5 AC136604.1-202ENST00000425471 771 ntBASIC17.6■□□□□ 0.41
UPF2Q9HAU5 BASP1P1-201ENST00000430708 665 ntBASIC17.6■□□□□ 0.41
UPF2Q9HAU5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 AL162726.2-201ENST00000438986 1017 ntBASIC17.6■□□□□ 0.41
UPF2Q9HAU5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 AL035414.1-201ENST00000451327 857 ntBASIC17.6■□□□□ 0.41
UPF2Q9HAU5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 AL391280.1-201ENST00000506969 1062 ntBASIC17.6■□□□□ 0.41
UPF2Q9HAU5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 RN7SL48P-201ENST00000579283 293 ntBASIC17.6■□□□□ 0.41
UPF2Q9HAU5 CLUHP6-201ENST00000580789 941 ntBASIC17.6■□□□□ 0.41
UPF2Q9HAU5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF2Q9HAU5 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 PDIA3P1-201ENST00000471856 1510 ntBASIC17.59■□□□□ 0.41
UPF2Q9HAU5 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 AC024075.2-201ENST00000598112 1473 ntBASIC17.59■□□□□ 0.41
UPF2Q9HAU5 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 MIR1233-2-201ENST00000408138 82 ntBASIC17.59■□□□□ 0.41
UPF2Q9HAU5 MIR1233-1-201ENST00000408722 82 ntBASIC17.59■□□□□ 0.41
UPF2Q9HAU5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 AC011495.1-201ENST00000498085 584 ntBASIC17.59■□□□□ 0.41
UPF2Q9HAU5 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 AL691403.2-201ENST00000618460 490 ntBASIC17.59■□□□□ 0.41
UPF2Q9HAU5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
UPF2Q9HAU5 AC009093.2-202ENST00000620513 2079 ntBASIC17.59■□□□□ 0.41
UPF2Q9HAU5 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms