Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.76□□□□□ -0.37
VRK1Q99986 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
VRK1Q99986 POM121L10P-201ENST00000436994 1285 ntBASIC12.76□□□□□ -0.37
VRK1Q99986 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 HIST2H2BB-201ENST00000449108 381 ntBASIC12.76□□□□□ -0.37
VRK1Q99986 TPT1P11-201ENST00000458482 498 ntBASIC12.76□□□□□ -0.37
VRK1Q99986 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.76□□□□□ -0.37
VRK1Q99986 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.76□□□□□ -0.37
VRK1Q99986 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.76□□□□□ -0.37
VRK1Q99986 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.76□□□□□ -0.37
VRK1Q99986 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 AC007663.3-201ENST00000609632 465 ntBASIC12.76□□□□□ -0.37
VRK1Q99986 AP001002.3-201ENST00000623482 206 ntBASIC12.76□□□□□ -0.37
VRK1Q99986 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
VRK1Q99986 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
VRK1Q99986 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 AL591122.2-201ENST00000624125 1853 ntBASIC12.76□□□□□ -0.37
VRK1Q99986 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
VRK1Q99986 AP000845.1-201ENST00000581677 2131 ntBASIC12.76□□□□□ -0.37
VRK1Q99986 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VRK1Q99986 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.76□□□□□ -0.37
VRK1Q99986 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VRK1Q99986 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
VRK1Q99986 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
VRK1Q99986 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.75□□□□□ -0.37
VRK1Q99986 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.75□□□□□ -0.37
VRK1Q99986 AL136309.1-201ENST00000403917 691 ntBASIC12.75□□□□□ -0.37
VRK1Q99986 MIR663B-201ENST00000408361 115 ntBASIC12.75□□□□□ -0.37
VRK1Q99986 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 LILRP1-201ENST00000444199 1370 ntBASIC12.75□□□□□ -0.37
VRK1Q99986 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
VRK1Q99986 HSPB1P2-201ENST00000448722 546 ntBASIC12.75□□□□□ -0.37
VRK1Q99986 AC004898.1-201ENST00000451057 766 ntBASIC12.75□□□□□ -0.37
VRK1Q99986 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.75□□□□□ -0.37
VRK1Q99986 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.75□□□□□ -0.37
VRK1Q99986 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.75□□□□□ -0.37
VRK1Q99986 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.75□□□□□ -0.37
VRK1Q99986 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 MIR4683-201ENST00000579659 81 ntBASIC12.75□□□□□ -0.37
VRK1Q99986 AC020914.3-201ENST00000594712 304 ntBASIC12.75□□□□□ -0.37
VRK1Q99986 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 AL136301.1-201ENST00000615830 422 ntBASIC12.75□□□□□ -0.37
VRK1Q99986 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
VRK1Q99986 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VRK1Q99986 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VRK1Q99986 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VRK1Q99986 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms