Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC025279.2-201ENST00000569730 653 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 MIR6775-201ENST00000617557 69 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 COX11-210ENST00000639671 696 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 MSTO2P-201ENST00000314835 1709 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 AC009093.10-201ENST00000641956 1442 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 AC064801.2-201ENST00000625052 1303 ntBASIC13.12□□□□□ -0.31
SNX18Q96RF0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.12□□□□□ -0.31
SNX18Q96RF0 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SNX18Q96RF0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 CD8B2-202ENST00000417670 633 ntBASIC13.11□□□□□ -0.31
SNX18Q96RF0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 AL355864.2-201ENST00000447420 863 ntBASIC13.11□□□□□ -0.31
SNX18Q96RF0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 MIR4259-201ENST00000584466 101 ntBASIC13.11□□□□□ -0.31
SNX18Q96RF0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 AC008825.2-201ENST00000603374 718 ntBASIC13.11□□□□□ -0.31
SNX18Q96RF0 MIR6799-201ENST00000620297 69 ntBASIC13.11□□□□□ -0.31
SNX18Q96RF0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 AOC4P-203ENST00000566825 2289 ntBASIC13.11□□□□□ -0.31
SNX18Q96RF0 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SNX18Q96RF0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SNX18Q96RF0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 AC020910.5-201ENST00000623668 1865 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 AC011498.7-201ENST00000624986 2027 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 CICP1-201ENST00000416803 2410 ntBASIC13.1□□□□□ -0.31
SNX18Q96RF0 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SNX18Q96RF0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNX18Q96RF0 AC012617.1-204ENST00000586340 2305 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms