Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 AC004898.1-201ENST00000451057 766 ntBASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 AL022334.2-201ENST00000610000 484 ntBASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 AL008638.5-201ENST00000623814 1298 ntBASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 AC068760.1-201ENST00000493579 1953 ntBASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM5Q96HC4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
PDLIM5Q96HC4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
PDLIM5Q96HC4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.9□□□□□ -0.19
PDLIM5Q96HC4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PDLIM5Q96HC4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 AL356585.2-201ENST00000625078 2396 ntBASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 GK-202ENST00000378941 458 ntTSL 3 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 RN7SL530P-201ENST00000485097 298 ntBASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 AC125604.1-201ENST00000496255 707 ntBASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 AC116345.2-201ENST00000512837 523 ntBASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 SBF1P1-201ENST00000444527 5631 ntBASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.89□□□□□ -0.19
PDLIM5Q96HC4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AC008620.2-201ENST00000510294 1569 ntBASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms