Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AC078819.1-201ENST00000547454 765 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AC012085.1-201ENST00000548270 765 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 RN7SL713P-201ENST00000582127 302 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 REXO1L1P-201ENST00000379010 6598 ntBASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.19■□□□□ 0.02
CCDC50Q8IVM0 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC020658.7-201ENST00000624274 2442 ntBASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 MIR497HG-202ENST00000572453 3838 ntBASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC073413.1-201ENST00000603927 732 ntBASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC027601.3-201ENST00000622907 509 ntBASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC006453.4-201ENST00000636949 1252 ntBASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 KRT8P4-201ENST00000509735 1454 ntBASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC50Q8IVM0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CCDC50Q8IVM0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms