Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AP000812.2-201ENST00000538934 718 ntBASIC13.35□□□□□ -0.27
REEP3Q6NUK4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 AC009884.2-201ENST00000603110 324 ntBASIC13.35□□□□□ -0.27
REEP3Q6NUK4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 AC061965.1-201ENST00000560524 1465 ntBASIC13.35□□□□□ -0.27
REEP3Q6NUK4 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
REEP3Q6NUK4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 FAM58BP-201ENST00000439056 645 ntBASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AP006547.1-201ENST00000563435 692 ntBASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AC009955.4-201ENST00000597192 544 ntBASIC13.34□□□□□ -0.27
REEP3Q6NUK4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.34□□□□□ -0.27
REEP3Q6NUK4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 IGHV3-72-202ENST00000621503 303 ntBASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AL591471.1-201ENST00000621855 229 ntBASIC13.34□□□□□ -0.27
REEP3Q6NUK4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 DGCR9-201ENST00000609630 2415 ntBASIC13.34□□□□□ -0.27
REEP3Q6NUK4 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 AL590824.1-201ENST00000403828 1349 ntBASIC13.34□□□□□ -0.27
REEP3Q6NUK4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
REEP3Q6NUK4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
REEP3Q6NUK4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
REEP3Q6NUK4 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.33□□□□□ -0.27
REEP3Q6NUK4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.27
REEP3Q6NUK4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.33□□□□□ -0.27
REEP3Q6NUK4 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
REEP3Q6NUK4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
REEP3Q6NUK4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.33□□□□□ -0.27
REEP3Q6NUK4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
REEP3Q6NUK4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms