Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.06□□□□□ -0.32
CXCR4P61073 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCR4P61073 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.05□□□□□ -0.32
CXCR4P61073 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CXCR4P61073 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.05□□□□□ -0.32
CXCR4P61073 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.05□□□□□ -0.32
CXCR4P61073 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCR4P61073 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.05□□□□□ -0.32
CXCR4P61073 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCR4P61073 AL731571.1-201ENST00000617058 5428 ntBASIC13.05□□□□□ -0.32
CXCR4P61073 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCR4P61073 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CXCR4P61073 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.05□□□□□ -0.32
CXCR4P61073 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CXCR4P61073 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.05□□□□□ -0.32
CXCR4P61073 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCR4P61073 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CXCR4P61073 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCR4P61073 AC106028.4-201ENST00000614509 607 ntBASIC13.05□□□□□ -0.32
CXCR4P61073 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.05□□□□□ -0.32
CXCR4P61073 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCR4P61073 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CXCR4P61073 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CXCR4P61073 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CXCR4P61073 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 AL358781.1-202ENST00000321081 1360 ntBASIC13.05□□□□□ -0.32
CXCR4P61073 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCR4P61073 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.04□□□□□ -0.32
CXCR4P61073 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CXCR4P61073 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 AC061965.1-201ENST00000560524 1465 ntBASIC13.04□□□□□ -0.32
CXCR4P61073 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.04□□□□□ -0.32
CXCR4P61073 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.04□□□□□ -0.32
CXCR4P61073 AC020910.5-201ENST00000623668 1865 ntBASIC13.04□□□□□ -0.32
CXCR4P61073 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CXCR4P61073 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CXCR4P61073 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.04□□□□□ -0.32
CXCR4P61073 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.04□□□□□ -0.32
CXCR4P61073 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 MESTP3-201ENST00000503460 968 ntBASIC13.04□□□□□ -0.32
CXCR4P61073 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.04□□□□□ -0.32
CXCR4P61073 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.04□□□□□ -0.32
CXCR4P61073 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.04□□□□□ -0.32
CXCR4P61073 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CXCR4P61073 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.04□□□□□ -0.32
CXCR4P61073 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.04□□□□□ -0.32
CXCR4P61073 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.04□□□□□ -0.32
CXCR4P61073 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
CXCR4P61073 LINC02084-201ENST00000606069 1096 ntBASIC13.04□□□□□ -0.32
CXCR4P61073 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CXCR4P61073 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCR4P61073 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms