Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.37□□□□□ -0.27
PSMD4P55036 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.37□□□□□ -0.27
PSMD4P55036 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.37□□□□□ -0.27
PSMD4P55036 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.37□□□□□ -0.27
PSMD4P55036 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.37□□□□□ -0.27
PSMD4P55036 KLF2P1-201ENST00000447438 1042 ntBASIC13.37□□□□□ -0.27
PSMD4P55036 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.37□□□□□ -0.27
PSMD4P55036 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.37□□□□□ -0.27
PSMD4P55036 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 BNIP3P13-201ENST00000599968 566 ntBASIC13.37□□□□□ -0.27
PSMD4P55036 AC005695.3-201ENST00000614522 232 ntBASIC13.37□□□□□ -0.27
PSMD4P55036 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.37□□□□□ -0.27
PSMD4P55036 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.37□□□□□ -0.27
PSMD4P55036 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.37□□□□□ -0.27
PSMD4P55036 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PSMD4P55036 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PSMD4P55036 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PSMD4P55036 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PSMD4P55036 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.37□□□□□ -0.27
PSMD4P55036 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
PSMD4P55036 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.37□□□□□ -0.27
PSMD4P55036 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.37□□□□□ -0.27
PSMD4P55036 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.37□□□□□ -0.27
PSMD4P55036 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PSMD4P55036 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PSMD4P55036 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.36□□□□□ -0.27
PSMD4P55036 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.36□□□□□ -0.27
PSMD4P55036 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PSMD4P55036 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 AC090643.2-201ENST00000623442 2029 ntBASIC13.36□□□□□ -0.27
PSMD4P55036 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PSMD4P55036 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.36□□□□□ -0.27
PSMD4P55036 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
PSMD4P55036 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.36□□□□□ -0.27
PSMD4P55036 RNMTL1P1-201ENST00000454103 560 ntBASIC13.36□□□□□ -0.27
PSMD4P55036 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.36□□□□□ -0.27
PSMD4P55036 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 AC005740.2-201ENST00000511085 419 ntBASIC13.36□□□□□ -0.27
PSMD4P55036 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.36□□□□□ -0.27
PSMD4P55036 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.36□□□□□ -0.27
PSMD4P55036 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 AC005730.2-201ENST00000564549 1184 ntBASIC13.36□□□□□ -0.27
PSMD4P55036 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.36□□□□□ -0.27
PSMD4P55036 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 AC090386.2-201ENST00000623010 1039 ntBASIC13.36□□□□□ -0.27
PSMD4P55036 AC004923.1-202ENST00000642106 209 ntBASIC13.36□□□□□ -0.27
PSMD4P55036 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PSMD4P55036 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 REXO1L1P-201ENST00000379010 6598 ntBASIC13.36□□□□□ -0.27
PSMD4P55036 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
PSMD4P55036 AC004899.1-201ENST00000424687 1714 ntBASIC13.36□□□□□ -0.27
PSMD4P55036 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PSMD4P55036 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PSMD4P55036 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms