Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.88□□□□□ -0.19
PDX1P52945 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.88□□□□□ -0.19
PDX1P52945 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PDX1P52945 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PDX1P52945 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.88□□□□□ -0.19
PDX1P52945 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.88□□□□□ -0.19
PDX1P52945 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PDX1P52945 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.88□□□□□ -0.19
PDX1P52945 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PDX1P52945 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PDX1P52945 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PDX1P52945 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PDX1P52945 ST13P19-201ENST00000442505 1124 ntBASIC13.88□□□□□ -0.19
PDX1P52945 PIN4P1-201ENST00000451079 396 ntBASIC13.88□□□□□ -0.19
PDX1P52945 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 RN7SL277P-201ENST00000481521 288 ntBASIC13.88□□□□□ -0.19
PDX1P52945 RN7SL530P-201ENST00000485097 298 ntBASIC13.88□□□□□ -0.19
PDX1P52945 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PDX1P52945 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.88□□□□□ -0.19
PDX1P52945 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.88□□□□□ -0.19
PDX1P52945 AC124068.2-201ENST00000569473 1109 ntBASIC13.88□□□□□ -0.19
PDX1P52945 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.88□□□□□ -0.19
PDX1P52945 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.88□□□□□ -0.19
PDX1P52945 AC005041.3-201ENST00000606287 649 ntBASIC13.88□□□□□ -0.19
PDX1P52945 AC107464.3-201ENST00000609172 737 ntBASIC13.88□□□□□ -0.19
PDX1P52945 AC105137.3-201ENST00000617588 984 ntBASIC13.88□□□□□ -0.19
PDX1P52945 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PDX1P52945 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.88□□□□□ -0.19
PDX1P52945 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.88□□□□□ -0.19
PDX1P52945 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDX1P52945 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.87□□□□□ -0.19
PDX1P52945 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.87□□□□□ -0.19
PDX1P52945 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PDX1P52945 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PDX1P52945 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDX1P52945 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 KHSRPP1-201ENST00000427983 1768 ntBASIC13.87□□□□□ -0.19
PDX1P52945 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PDX1P52945 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.87□□□□□ -0.19
PDX1P52945 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.87□□□□□ -0.19
PDX1P52945 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PDX1P52945 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 Z69890.1-201ENST00000382990 339 ntBASIC13.87□□□□□ -0.19
PDX1P52945 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 HIST2H2BA-201ENST00000412169 381 ntBASIC13.87□□□□□ -0.19
PDX1P52945 AC097065.1-201ENST00000425737 517 ntBASIC13.87□□□□□ -0.19
PDX1P52945 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.87□□□□□ -0.19
PDX1P52945 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.87□□□□□ -0.19
PDX1P52945 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.87□□□□□ -0.19
PDX1P52945 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.87□□□□□ -0.19
PDX1P52945 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.87□□□□□ -0.19
PDX1P52945 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.87□□□□□ -0.19
PDX1P52945 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.87□□□□□ -0.19
PDX1P52945 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.87□□□□□ -0.19
PDX1P52945 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.87□□□□□ -0.19
PDX1P52945 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.87□□□□□ -0.19
PDX1P52945 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.87□□□□□ -0.19
PDX1P52945 AC127024.7-201ENST00000625101 200 ntBASIC13.87□□□□□ -0.19
PDX1P52945 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDX1P52945 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDX1P52945 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms