Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.34□□□□□ -0.27
EFNA3P52797 AC073869.2-201ENST00000417338 1026 ntBASIC13.34□□□□□ -0.27
EFNA3P52797 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNA3P52797 MRPL22P1-201ENST00000505398 616 ntBASIC13.34□□□□□ -0.27
EFNA3P52797 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNA3P52797 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
EFNA3P52797 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.34□□□□□ -0.27
EFNA3P52797 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.34□□□□□ -0.27
EFNA3P52797 AC084781.1-201ENST00000613737 656 ntBASIC13.34□□□□□ -0.27
EFNA3P52797 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.34□□□□□ -0.27
EFNA3P52797 AC103691.2-201ENST00000618824 433 ntBASIC13.34□□□□□ -0.27
EFNA3P52797 HSPA7-201ENST00000445535 1927 ntBASIC13.34□□□□□ -0.27
EFNA3P52797 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
EFNA3P52797 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
EFNA3P52797 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNA3P52797 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 AC006480.2-201ENST00000609770 1337 ntBASIC13.34□□□□□ -0.27
EFNA3P52797 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNA3P52797 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNA3P52797 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
EFNA3P52797 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.33□□□□□ -0.27
EFNA3P52797 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
EFNA3P52797 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
EFNA3P52797 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
EFNA3P52797 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.33□□□□□ -0.27
EFNA3P52797 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNA3P52797 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
EFNA3P52797 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
EFNA3P52797 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 AC026316.1-201ENST00000398900 414 ntBASIC13.33□□□□□ -0.28
EFNA3P52797 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.33□□□□□ -0.28
EFNA3P52797 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.33□□□□□ -0.28
EFNA3P52797 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.33□□□□□ -0.28
EFNA3P52797 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.33□□□□□ -0.28
EFNA3P52797 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNA3P52797 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.33□□□□□ -0.28
EFNA3P52797 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNA3P52797 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNA3P52797 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.33□□□□□ -0.28
EFNA3P52797 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNA3P52797 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNA3P52797 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 TUBB8P4-201ENST00000511806 1324 ntBASIC13.33□□□□□ -0.28
EFNA3P52797 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNA3P52797 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 MARK2P16-201ENST00000605714 1723 ntBASIC13.33□□□□□ -0.28
EFNA3P52797 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNA3P52797 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms