Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1EP49674 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1EP49674 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CSNK1EP49674 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CSNK1EP49674 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1EP49674 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CSNK1EP49674 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.91□□□□□ -0.18
CSNK1EP49674 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CSNK1EP49674 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.9□□□□□ -0.18
CSNK1EP49674 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CSNK1EP49674 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CSNK1EP49674 COX20P1-201ENST00000366529 357 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CSNK1EP49674 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 OR51A9P-201ENST00000422578 911 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 AC092573.1-201ENST00000433054 884 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.9□□□□□ -0.18
CSNK1EP49674 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.9□□□□□ -0.18
CSNK1EP49674 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.9□□□□□ -0.18
CSNK1EP49674 EEF1GP8-201ENST00000506566 1154 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 AC022447.6-201ENST00000515522 438 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 AC090136.2-201ENST00000517809 420 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 AL132994.1-201ENST00000554098 400 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.9□□□□□ -0.18
CSNK1EP49674 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.9□□□□□ -0.18
CSNK1EP49674 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.9□□□□□ -0.18
CSNK1EP49674 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 AP005212.2-201ENST00000584979 510 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 AC008972.2-201ENST00000606587 494 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 AL009176.1-201ENST00000607876 650 ntBASIC13.9□□□□□ -0.18
CSNK1EP49674 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CSNK1EP49674 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.9□□□□□ -0.18
CSNK1EP49674 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.9□□□□□ -0.18
CSNK1EP49674 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CSNK1EP49674 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CSNK1EP49674 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1EP49674 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1EP49674 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.9□□□□□ -0.19
CSNK1EP49674 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CSNK1EP49674 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.9□□□□□ -0.19
CSNK1EP49674 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
CSNK1EP49674 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.9□□□□□ -0.19
CSNK1EP49674 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CSNK1EP49674 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CSNK1EP49674 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CSNK1EP49674 AC144831.1-201ENST00000573312 2656 ntBASIC13.89□□□□□ -0.19
CSNK1EP49674 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.89□□□□□ -0.19
CSNK1EP49674 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
CSNK1EP49674 INTS4P1-203ENST00000641008 3683 ntBASIC13.89□□□□□ -0.19
CSNK1EP49674 RPL13AP3-202ENST00000494676 1473 ntBASIC13.89□□□□□ -0.19
CSNK1EP49674 AC007952.5-201ENST00000572818 1486 ntBASIC13.89□□□□□ -0.19
CSNK1EP49674 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.89□□□□□ -0.19
CSNK1EP49674 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CSNK1EP49674 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CSNK1EP49674 AP000354.1-201ENST00000396982 456 ntBASIC13.89□□□□□ -0.19
CSNK1EP49674 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1EP49674 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.89□□□□□ -0.19
CSNK1EP49674 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.89□□□□□ -0.19
CSNK1EP49674 KRT18P46-201ENST00000435568 1279 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms