Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.34■□□□□ 0.05
SSR1P43307 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.34■□□□□ 0.05
SSR1P43307 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.33■□□□□ 0.05
SSR1P43307 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SSR1P43307 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.33■□□□□ 0.05
SSR1P43307 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SSR1P43307 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
SSR1P43307 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SSR1P43307 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
SSR1P43307 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 AC112492.5-201ENST00000421897 457 ntBASIC15.33■□□□□ 0.04
SSR1P43307 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.33■□□□□ 0.04
SSR1P43307 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.33■□□□□ 0.04
SSR1P43307 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.33■□□□□ 0.04
SSR1P43307 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.33■□□□□ 0.04
SSR1P43307 MIR3197-201ENST00000582241 73 ntBASIC15.33■□□□□ 0.04
SSR1P43307 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.33■□□□□ 0.04
SSR1P43307 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SSR1P43307 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 AC073413.1-201ENST00000603927 732 ntBASIC15.33■□□□□ 0.04
SSR1P43307 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 AL136301.1-201ENST00000615830 422 ntBASIC15.33■□□□□ 0.04
SSR1P43307 AC027601.3-201ENST00000622907 509 ntBASIC15.33■□□□□ 0.04
SSR1P43307 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC15.33■□□□□ 0.04
SSR1P43307 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SSR1P43307 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
SSR1P43307 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SSR1P43307 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.33■□□□□ 0.04
SSR1P43307 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.33■□□□□ 0.04
SSR1P43307 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SSR1P43307 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SSR1P43307 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 KRT8P24-201ENST00000560290 1559 ntBASIC15.32■□□□□ 0.04
SSR1P43307 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SSR1P43307 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SSR1P43307 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.32■□□□□ 0.04
SSR1P43307 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.32■□□□□ 0.04
SSR1P43307 CICP12-201ENST00000455801 843 ntBASIC15.32■□□□□ 0.04
SSR1P43307 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.32■□□□□ 0.04
SSR1P43307 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.32■□□□□ 0.04
SSR1P43307 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.32■□□□□ 0.04
SSR1P43307 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.32■□□□□ 0.04
SSR1P43307 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.32■□□□□ 0.04
SSR1P43307 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.32■□□□□ 0.04
SSR1P43307 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.32■□□□□ 0.04
SSR1P43307 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SSR1P43307 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.32■□□□□ 0.04
SSR1P43307 AC089987.1-201ENST00000551654 2209 ntBASIC15.32■□□□□ 0.04
SSR1P43307 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms