Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
CXCL5P42830 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
CXCL5P42830 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
CXCL5P42830 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC9.72□□□□□ -0.85
CXCL5P42830 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC9.72□□□□□ -0.85
CXCL5P42830 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC9.72□□□□□ -0.85
CXCL5P42830 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC9.72□□□□□ -0.85
CXCL5P42830 AC245100.3-201ENST00000441281 285 ntBASIC9.72□□□□□ -0.85
CXCL5P42830 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC9.72□□□□□ -0.85
CXCL5P42830 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC9.72□□□□□ -0.85
CXCL5P42830 FO681548.1-201ENST00000455617 1132 ntBASIC9.72□□□□□ -0.85
CXCL5P42830 AL512638.1-201ENST00000457493 794 ntBASIC9.72□□□□□ -0.85
CXCL5P42830 SPDYE18-201ENST00000510091 1050 ntBASIC9.72□□□□□ -0.85
CXCL5P42830 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
CXCL5P42830 ENPP7P5-201ENST00000541031 1031 ntBASIC9.72□□□□□ -0.85
CXCL5P42830 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
CXCL5P42830 AC124283.3-201ENST00000570869 594 ntBASIC9.72□□□□□ -0.85
CXCL5P42830 AC138761.1-201ENST00000584393 385 ntBASIC9.72□□□□□ -0.85
CXCL5P42830 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC9.72□□□□□ -0.85
CXCL5P42830 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC9.72□□□□□ -0.85
CXCL5P42830 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC9.72□□□□□ -0.85
CXCL5P42830 AC133539.2-201ENST00000604757 467 ntBASIC9.72□□□□□ -0.85
CXCL5P42830 AC093726.1-201ENST00000608064 963 ntBASIC9.72□□□□□ -0.85
CXCL5P42830 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC9.72□□□□□ -0.85
CXCL5P42830 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC9.72□□□□□ -0.85
CXCL5P42830 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.72□□□□□ -0.85
CXCL5P42830 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC9.72□□□□□ -0.85
CXCL5P42830 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC9.72□□□□□ -0.85
CXCL5P42830 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
CXCL5P42830 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
CXCL5P42830 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
CXCL5P42830 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC9.72□□□□□ -0.85
CXCL5P42830 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC9.72□□□□□ -0.85
CXCL5P42830 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
CXCL5P42830 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 AL365181.3-201ENST00000605886 3222 ntBASIC9.71□□□□□ -0.85
CXCL5P42830 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
CXCL5P42830 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC9.71□□□□□ -0.85
CXCL5P42830 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC9.71□□□□□ -0.85
CXCL5P42830 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
CXCL5P42830 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
CXCL5P42830 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC9.71□□□□□ -0.85
CXCL5P42830 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 FAM90A12P-201ENST00000519497 2375 ntBASIC9.71□□□□□ -0.85
CXCL5P42830 FAM90A24P-201ENST00000520792 2369 ntBASIC9.71□□□□□ -0.85
CXCL5P42830 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
CXCL5P42830 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC9.71□□□□□ -0.85
CXCL5P42830 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
CXCL5P42830 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CXCL5P42830 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
CXCL5P42830 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
CXCL5P42830 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CXCL5P42830 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CXCL5P42830 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
CXCL5P42830 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
CXCL5P42830 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC9.71□□□□□ -0.86
CXCL5P42830 PTPA-215ENST00000432124 567 ntTSL 4 BASIC9.71□□□□□ -0.86
CXCL5P42830 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC9.71□□□□□ -0.86
CXCL5P42830 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC9.71□□□□□ -0.86
CXCL5P42830 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC9.71□□□□□ -0.86
CXCL5P42830 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
CXCL5P42830 DNAJB3-202ENST00000449667 1266 ntBASIC9.71□□□□□ -0.86
CXCL5P42830 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC9.71□□□□□ -0.86
CXCL5P42830 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CXCL5P42830 AC023310.3-201ENST00000557027 670 ntBASIC9.71□□□□□ -0.86
CXCL5P42830 AC100756.1-201ENST00000562736 682 ntBASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms