Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDE6BP35913 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 AJ011931.1-201ENST00000618749 2492 ntBASIC17.36■□□□□ 0.37
PDE6BP35913 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDE6BP35913 MIR1307-201ENST00000408840 149 ntBASIC17.36■□□□□ 0.37
PDE6BP35913 IFNWP2-201ENST00000431203 580 ntBASIC17.36■□□□□ 0.37
PDE6BP35913 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 RPS18P9-201ENST00000482817 460 ntBASIC17.36■□□□□ 0.37
PDE6BP35913 TBC1D3P6-201ENST00000505954 962 ntBASIC17.36■□□□□ 0.37
PDE6BP35913 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.36■□□□□ 0.37
PDE6BP35913 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC17.36■□□□□ 0.37
PDE6BP35913 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC17.36■□□□□ 0.37
PDE6BP35913 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC17.36■□□□□ 0.37
PDE6BP35913 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.36■□□□□ 0.37
PDE6BP35913 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDE6BP35913 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PDE6BP35913 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PDE6BP35913 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE6BP35913 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6BP35913 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
PDE6BP35913 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6BP35913 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6BP35913 AL137244.1-201ENST00000422931 865 ntBASIC17.35■□□□□ 0.37
PDE6BP35913 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PDE6BP35913 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE6BP35913 MIR2278-201ENST00000516344 96 ntBASIC17.35■□□□□ 0.37
PDE6BP35913 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE6BP35913 AL359219.1-201ENST00000556311 934 ntBASIC17.35■□□□□ 0.37
PDE6BP35913 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE6BP35913 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PDE6BP35913 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6BP35913 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.35■□□□□ 0.37
PDE6BP35913 AC026336.4-201ENST00000624565 1050 ntBASIC17.35■□□□□ 0.37
PDE6BP35913 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PDE6BP35913 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.35■□□□□ 0.37
PDE6BP35913 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
PDE6BP35913 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6BP35913 AC105917.1-201ENST00000506637 2539 ntBASIC17.35■□□□□ 0.37
PDE6BP35913 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6BP35913 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
PDE6BP35913 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDE6BP35913 PAUPAR-201ENST00000630360 2965 ntBASIC17.34■□□□□ 0.37
PDE6BP35913 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PDE6BP35913 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PDE6BP35913 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 RPL10-203ENST00000406022 748 ntTSL 3 BASIC17.34■□□□□ 0.37
PDE6BP35913 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.34■□□□□ 0.37
PDE6BP35913 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6BP35913 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6BP35913 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6BP35913 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.34■□□□□ 0.37
PDE6BP35913 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC17.34■□□□□ 0.37
PDE6BP35913 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.34■□□□□ 0.37
PDE6BP35913 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 CSTP2-201ENST00000610599 398 ntBASIC17.34■□□□□ 0.37
PDE6BP35913 PHF23-213ENST00000613632 850 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6BP35913 AC113385.2-201ENST00000614465 762 ntBASIC17.34■□□□□ 0.37
PDE6BP35913 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6BP35913 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6BP35913 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms