Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VCLP18206 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.46□□□□□ -0.09
VCLP18206 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.46□□□□□ -0.09
VCLP18206 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.46□□□□□ -0.09
VCLP18206 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.46□□□□□ -0.09
VCLP18206 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.46□□□□□ -0.09
VCLP18206 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.46□□□□□ -0.09
VCLP18206 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 MIR6720-201ENST00000611664 98 ntBASIC14.46□□□□□ -0.09
VCLP18206 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.46□□□□□ -0.09
VCLP18206 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VCLP18206 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
VCLP18206 AC009093.10-201ENST00000641956 1442 ntBASIC14.46□□□□□ -0.09
VCLP18206 AC020658.7-201ENST00000624274 2442 ntBASIC14.46□□□□□ -0.09
VCLP18206 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.46□□□□□ -0.09
VCLP18206 KRT8P24-201ENST00000560290 1559 ntBASIC14.46□□□□□ -0.09
VCLP18206 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VCLP18206 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VCLP18206 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VCLP18206 AC139712.1-201ENST00000378256 1875 ntBASIC14.46□□□□□ -0.1
VCLP18206 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VCLP18206 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VCLP18206 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VCLP18206 AC020907.1-201ENST00000616460 1350 ntBASIC14.46□□□□□ -0.1
VCLP18206 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VCLP18206 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
VCLP18206 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
VCLP18206 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
VCLP18206 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
VCLP18206 AC090505.1-201ENST00000430515 1834 ntBASIC14.45□□□□□ -0.1
VCLP18206 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VCLP18206 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 AC016397.2-201ENST00000624848 1985 ntBASIC14.45□□□□□ -0.1
VCLP18206 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VCLP18206 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.45□□□□□ -0.1
VCLP18206 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.45□□□□□ -0.1
VCLP18206 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.45□□□□□ -0.1
VCLP18206 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VCLP18206 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VCLP18206 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.45□□□□□ -0.1
VCLP18206 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.45□□□□□ -0.1
VCLP18206 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.45□□□□□ -0.1
VCLP18206 AC005740.2-201ENST00000511085 419 ntBASIC14.45□□□□□ -0.1
VCLP18206 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 AC103988.2-201ENST00000561804 725 ntBASIC14.45□□□□□ -0.1
VCLP18206 RN7SL163P-201ENST00000583100 276 ntBASIC14.45□□□□□ -0.1
VCLP18206 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.45□□□□□ -0.1
VCLP18206 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.45□□□□□ -0.1
VCLP18206 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VCLP18206 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
VCLP18206 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
VCLP18206 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VCLP18206 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.45□□□□□ -0.1
VCLP18206 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.45□□□□□ -0.1
VCLP18206 RN7SL832P-201ENST00000607781 1756 ntBASIC14.45□□□□□ -0.1
VCLP18206 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCLP18206 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VCLP18206 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms