Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 AP000346.4-201ENST00000614827 381 ntBASIC12.83□□□□□ -0.36
HLA-DOBP13765 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 AHCYP4-201ENST00000419201 1315 ntBASIC12.83□□□□□ -0.36
HLA-DOBP13765 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.83□□□□□ -0.36
HLA-DOBP13765 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DOBP13765 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 AC072061.1-201ENST00000569710 2234 ntBASIC12.82□□□□□ -0.36
HLA-DOBP13765 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 AP002353.1-201ENST00000528257 1599 ntBASIC12.82□□□□□ -0.36
HLA-DOBP13765 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 MIR1908-201ENST00000410394 80 ntBASIC12.82□□□□□ -0.36
HLA-DOBP13765 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 AC092580.1-201ENST00000433998 658 ntBASIC12.82□□□□□ -0.36
HLA-DOBP13765 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 AC090164.2-201ENST00000611487 516 ntBASIC12.82□□□□□ -0.36
HLA-DOBP13765 AL591471.1-201ENST00000621855 229 ntBASIC12.82□□□□□ -0.36
HLA-DOBP13765 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DOBP13765 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DOBP13765 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DOBP13765 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DOBP13765 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms