Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FAM228BP0C875 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.24■□□□□ 0.03
FAM228BP0C875 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
FAM228BP0C875 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
FAM228BP0C875 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.24■□□□□ 0.03
FAM228BP0C875 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FAM228BP0C875 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 AC061965.1-201ENST00000560524 1465 ntBASIC15.23■□□□□ 0.03
FAM228BP0C875 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 AC103592.1-201ENST00000394513 664 ntBASIC15.23■□□□□ 0.03
FAM228BP0C875 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.23■□□□□ 0.03
FAM228BP0C875 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.23■□□□□ 0.03
FAM228BP0C875 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.23■□□□□ 0.03
FAM228BP0C875 PGAM1P5-201ENST00000548011 764 ntBASIC15.23■□□□□ 0.03
FAM228BP0C875 AC100827.2-201ENST00000563214 1194 ntBASIC15.23■□□□□ 0.03
FAM228BP0C875 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 AC009884.2-201ENST00000603110 324 ntBASIC15.23■□□□□ 0.03
FAM228BP0C875 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FAM228BP0C875 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 AC125807.2-201ENST00000513358 3514 ntBASIC15.23■□□□□ 0.03
FAM228BP0C875 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
FAM228BP0C875 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FAM228BP0C875 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FAM228BP0C875 SALL4P6-201ENST00000429385 1691 ntBASIC15.22■□□□□ 0.03
FAM228BP0C875 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.22■□□□□ 0.03
FAM228BP0C875 SHMT1P1-201ENST00000419974 1312 ntBASIC15.22■□□□□ 0.03
FAM228BP0C875 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FAM228BP0C875 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
FAM228BP0C875 AC126335.2-201ENST00000623362 4637 ntBASIC15.22■□□□□ 0.03
FAM228BP0C875 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
FAM228BP0C875 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
FAM228BP0C875 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.22■□□□□ 0.03
FAM228BP0C875 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.22■□□□□ 0.03
FAM228BP0C875 OR2R1P-201ENST00000441404 914 ntBASIC15.22■□□□□ 0.03
FAM228BP0C875 AC012441.2-201ENST00000444843 739 ntBASIC15.22■□□□□ 0.03
FAM228BP0C875 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.22■□□□□ 0.03
FAM228BP0C875 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.22■□□□□ 0.03
FAM228BP0C875 AC023310.1-201ENST00000554836 735 ntBASIC15.22■□□□□ 0.03
FAM228BP0C875 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.22■□□□□ 0.03
FAM228BP0C875 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.22■□□□□ 0.03
FAM228BP0C875 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.22■□□□□ 0.03
FAM228BP0C875 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.22■□□□□ 0.03
FAM228BP0C875 AL591471.1-201ENST00000621855 229 ntBASIC15.22■□□□□ 0.03
FAM228BP0C875 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
FAM228BP0C875 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.22■□□□□ 0.03
FAM228BP0C875 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
FAM228BP0C875 MEX3B-202ENST00000558133 4333 ntBASIC15.22■□□□□ 0.03
FAM228BP0C875 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms