Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 SPDYE18-201ENST00000510091 1050 ntBASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 AC027237.1-201ENST00000560942 655 ntBASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 AC005586.2-201ENST00000563946 837 ntBASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 AC138696.2-201ENST00000607376 223 ntBASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 AC115284.2-201ENST00000624646 2054 ntBASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 AC060814.4-201ENST00000594169 2163 ntBASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 AC010970.1-201ENST00000445125 1848 ntBASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 AC027369.6-201ENST00000525520 931 ntBASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 RARRES2P5-201ENST00000564013 466 ntBASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 Z98257.2-202ENST00000641138 1548 ntBASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RCL1Q9Y2P8 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms