Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 HCG24-202ENST00000414398 717 ntTSL 3 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 HNRNPA1P23-201ENST00000491091 1133 ntBASIC19.05■□□□□ 0.64
PHF8Q9UPP1 CD44-224ENST00000526669 870 ntTSL 5 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 KRT8P34-201ENST00000577607 1044 ntBASIC19.05■□□□□ 0.64
PHF8Q9UPP1 RN7SL718P-201ENST00000581254 303 ntBASIC19.05■□□□□ 0.64
PHF8Q9UPP1 MIR4326-201ENST00000582203 59 ntBASIC19.05■□□□□ 0.64
PHF8Q9UPP1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.05■□□□□ 0.64
PHF8Q9UPP1 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 GH1-203ENST00000351388 685 ntTSL 2 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 AC005722.1-201ENST00000431878 964 ntBASIC19.04■□□□□ 0.64
PHF8Q9UPP1 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 FAM187B2P-201ENST00000577135 713 ntBASIC19.04■□□□□ 0.64
PHF8Q9UPP1 AC060766.1-201ENST00000590824 627 ntBASIC19.04■□□□□ 0.64
PHF8Q9UPP1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 AC110057.1-201ENST00000636031 898 ntBASIC19.04■□□□□ 0.64
PHF8Q9UPP1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PHF8Q9UPP1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 AC068587.6-202ENST00000641839 5619 ntBASIC19.03■□□□□ 0.64
PHF8Q9UPP1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 RNA5SP491-201ENST00000362936 118 ntBASIC19.03■□□□□ 0.64
PHF8Q9UPP1 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 AC079250.1-201ENST00000456046 531 ntBASIC19.03■□□□□ 0.64
PHF8Q9UPP1 HNRNPA3P6-201ENST00000472163 1006 ntBASIC19.03■□□□□ 0.64
PHF8Q9UPP1 AC147876.1-201ENST00000504408 322 ntBASIC19.03■□□□□ 0.64
PHF8Q9UPP1 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 KF455155.1-201ENST00000604493 303 ntBASIC19.03■□□□□ 0.64
PHF8Q9UPP1 NEK4P3-201ENST00000604859 544 ntBASIC19.03■□□□□ 0.64
PHF8Q9UPP1 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 AC026120.2-201ENST00000617239 309 ntBASIC19.03■□□□□ 0.64
PHF8Q9UPP1 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 Z98885.3-201ENST00000624882 1757 ntBASIC19.03■□□□□ 0.64
PHF8Q9UPP1 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 DDC-204ENST00000426377 1700 ntTSL 3 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PHF8Q9UPP1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 873.7 ms