Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 TIMM8BP1-201ENST00000452384 211 ntBASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 AC022616.1-201ENST00000518688 554 ntBASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 SLC25A6P4-201ENST00000586535 553 ntBASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 AC107373.2-201ENST00000607735 490 ntBASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 AL035456.1-201ENST00000456064 1369 ntBASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX1-2Q9UD57 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 LPP-AS2-201ENST00000605573 2852 ntBASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 AL662844.1-201ENST00000546340 181 ntBASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 AC005586.2-201ENST00000563946 837 ntBASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 AC020917.4-201ENST00000623994 1999 ntBASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
NKX1-2Q9UD57 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 AC004870.1-201ENST00000315132 882 ntBASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 FAM58CP-201ENST00000435741 640 ntBASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 EMBP1-201ENST00000458200 901 ntBASIC13.55□□□□□ -0.24
NKX1-2Q9UD57 SERBP1P3-201ENST00000459980 809 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms