Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 BX284668.2-205ENST00000619677 828 ntBASIC14.31□□□□□ -0.12
SPASTQ9UBP0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 AC092299.1-201ENST00000632679 757 ntBASIC14.31□□□□□ -0.12
SPASTQ9UBP0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 AC006480.2-201ENST00000609770 1337 ntBASIC14.31□□□□□ -0.12
SPASTQ9UBP0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPASTQ9UBP0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 AC026320.2-201ENST00000434379 478 ntBASIC14.3□□□□□ -0.12
SPASTQ9UBP0 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.3□□□□□ -0.12
SPASTQ9UBP0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.3□□□□□ -0.12
SPASTQ9UBP0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 AC139712.1-201ENST00000378256 1875 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 BX640514.1-201ENST00000583223 1918 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 AL627231.1-201ENST00000394467 1125 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 AC026316.1-201ENST00000398900 414 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 KRT18P36-201ENST00000411618 1276 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 AC026803.1-201ENST00000569130 274 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 SPCS2P2-201ENST00000603270 608 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms