Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 F2-205ENST00000530231 1849 ntTSL 5 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UPF2Q9HAU5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 AC011481.3-201ENST00000623895 5594 ntBASIC17.62■□□□□ 0.41
UPF2Q9HAU5 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 AC009486.1-201ENST00000569860 813 ntBASIC17.62■□□□□ 0.41
UPF2Q9HAU5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UPF2Q9HAU5 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 USP47-202ENST00000339865 7775 ntTSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 TNRC18P1-201ENST00000502875 3650 ntBASIC17.61■□□□□ 0.41
UPF2Q9HAU5 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 RN7SKP175-201ENST00000408472 289 ntBASIC17.61■□□□□ 0.41
UPF2Q9HAU5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 TMEM261P1-201ENST00000604899 340 ntBASIC17.61■□□□□ 0.41
UPF2Q9HAU5 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 AC002472.3-201ENST00000640124 621 ntBASIC17.61■□□□□ 0.41
UPF2Q9HAU5 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF2Q9HAU5 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms