Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PTPN18Q99952 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN18Q99952 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PTPN18Q99952 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
PTPN18Q99952 AC008620.2-201ENST00000510294 1569 ntBASIC16■□□□□ 0.15
PTPN18Q99952 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PTPN18Q99952 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 MTHFR-210ENST00000641407 2387 ntBASIC16■□□□□ 0.15
PTPN18Q99952 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16■□□□□ 0.15
PTPN18Q99952 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
PTPN18Q99952 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC16■□□□□ 0.15
PTPN18Q99952 KRT18P33-201ENST00000398525 1043 ntBASIC16■□□□□ 0.15
PTPN18Q99952 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PTPN18Q99952 AC010086.2-201ENST00000428616 226 ntBASIC16■□□□□ 0.15
PTPN18Q99952 AC006328.1-201ENST00000437571 379 ntBASIC16■□□□□ 0.15
PTPN18Q99952 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC16■□□□□ 0.15
PTPN18Q99952 IGKV1OR-2-201ENST00000457995 350 ntBASIC16■□□□□ 0.15
PTPN18Q99952 RN7SL684P-201ENST00000465665 294 ntBASIC16■□□□□ 0.15
PTPN18Q99952 RN7SL846P-201ENST00000467429 292 ntBASIC16■□□□□ 0.15
PTPN18Q99952 AC104212.2-201ENST00000478813 628 ntBASIC16■□□□□ 0.15
PTPN18Q99952 AC099328.1-201ENST00000498809 1030 ntBASIC16■□□□□ 0.15
PTPN18Q99952 RNA5SP420-201ENST00000516997 137 ntBASIC16■□□□□ 0.15
PTPN18Q99952 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC16■□□□□ 0.15
PTPN18Q99952 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
PTPN18Q99952 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC16■□□□□ 0.15
PTPN18Q99952 AL353622.2-201ENST00000605846 425 ntBASIC16■□□□□ 0.15
PTPN18Q99952 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC16■□□□□ 0.15
PTPN18Q99952 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16■□□□□ 0.15
PTPN18Q99952 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16■□□□□ 0.15
PTPN18Q99952 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PTPN18Q99952 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 KRT8P38-201ENST00000441370 1430 ntBASIC16■□□□□ 0.15
PTPN18Q99952 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16■□□□□ 0.15
PTPN18Q99952 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16■□□□□ 0.15
PTPN18Q99952 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN18Q99952 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PTPN18Q99952 AC103702.1-201ENST00000548801 2630 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PTPN18Q99952 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 AL590824.1-201ENST00000403828 1349 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN18Q99952 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN18Q99952 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 OR7E155P-201ENST00000412208 1014 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.99■□□□□ 0.15
PTPN18Q99952 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN18Q99952 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.99■□□□□ 0.15
PTPN18Q99952 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 RN7SL523P-201ENST00000484401 298 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN18Q99952 ISL1-203ENST00000511384 981 ntTSL 5 BASIC15.99■□□□□ 0.15
PTPN18Q99952 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.99■□□□□ 0.15
PTPN18Q99952 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN18Q99952 AP003040.1-201ENST00000532044 1024 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 RN7SL480P-201ENST00000581481 294 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 MIR4326-201ENST00000582203 59 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 ACTBP9-201ENST00000587663 1099 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 AC009041.4-201ENST00000620075 638 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN18Q99952 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 AC064850.1-201ENST00000413279 1398 ntBASIC15.99■□□□□ 0.15
PTPN18Q99952 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PTPN18Q99952 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN18Q99952 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PTPN18Q99952 AC073347.1-201ENST00000421633 2643 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.98■□□□□ 0.15
PTPN18Q99952 AL008638.4-201ENST00000624792 1315 ntBASIC15.98■□□□□ 0.15
PTPN18Q99952 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN18Q99952 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.98■□□□□ 0.15
PTPN18Q99952 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms