Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S1Q92572 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S1Q92572 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.64□□□□□ -0.39
AP3S1Q92572 RPL37AP1-201ENST00000412502 279 ntBASIC12.64□□□□□ -0.39
AP3S1Q92572 SPDYE7P-202ENST00000420373 878 ntBASIC12.64□□□□□ -0.39
AP3S1Q92572 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.64□□□□□ -0.39
AP3S1Q92572 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.64□□□□□ -0.39
AP3S1Q92572 AL512361.1-201ENST00000554200 418 ntBASIC12.64□□□□□ -0.39
AP3S1Q92572 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S1Q92572 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 AL596442.2-201ENST00000610240 980 ntBASIC12.64□□□□□ -0.39
AP3S1Q92572 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
AP3S1Q92572 FAM197Y3-203ENST00000618346 717 ntBASIC12.64□□□□□ -0.39
AP3S1Q92572 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S1Q92572 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S1Q92572 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
AP3S1Q92572 AL358781.1-202ENST00000321081 1360 ntBASIC12.64□□□□□ -0.39
AP3S1Q92572 ZNF259P1-201ENST00000407656 1365 ntBASIC12.64□□□□□ -0.39
AP3S1Q92572 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 AC110048.1-201ENST00000604293 2157 ntBASIC12.64□□□□□ -0.39
AP3S1Q92572 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.64□□□□□ -0.39
AP3S1Q92572 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.64□□□□□ -0.39
AP3S1Q92572 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.64□□□□□ -0.39
AP3S1Q92572 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 AP001972.5-201ENST00000624624 2338 ntBASIC12.63□□□□□ -0.39
AP3S1Q92572 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
AP3S1Q92572 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
AP3S1Q92572 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
AP3S1Q92572 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 MRPL3P1-201ENST00000400109 1033 ntBASIC12.63□□□□□ -0.39
AP3S1Q92572 ARSEP1-201ENST00000420443 635 ntBASIC12.63□□□□□ -0.39
AP3S1Q92572 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 AC005014.1-201ENST00000432006 2976 ntBASIC12.63□□□□□ -0.39
AP3S1Q92572 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 AC114812.1-204ENST00000449669 728 ntBASIC12.63□□□□□ -0.39
AP3S1Q92572 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.63□□□□□ -0.39
AP3S1Q92572 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 RPL13AP23-201ENST00000480739 586 ntBASIC12.63□□□□□ -0.39
AP3S1Q92572 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.63□□□□□ -0.39
AP3S1Q92572 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.63□□□□□ -0.39
AP3S1Q92572 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 AC010336.2-201ENST00000564226 506 ntBASIC12.63□□□□□ -0.39
AP3S1Q92572 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AP3S1Q92572 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.63□□□□□ -0.39
AP3S1Q92572 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.63□□□□□ -0.39
AP3S1Q92572 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.63□□□□□ -0.39
AP3S1Q92572 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.63□□□□□ -0.39
AP3S1Q92572 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP3S1Q92572 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
AP3S1Q92572 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP3S1Q92572 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP3S1Q92572 AC108024.1-201ENST00000626286 1721 ntBASIC12.62□□□□□ -0.39
AP3S1Q92572 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms