Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLHC1Q8NHS4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 AC010141.1-201ENST00000411585 623 ntBASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 CHMP1AP1-201ENST00000445563 662 ntBASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 C2orf69P2-201ENST00000562032 1123 ntBASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 AHCYP2-201ENST00000430630 1300 ntBASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 PCDHA5-203ENST00000614258 4248 ntBASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 AC099521.3-201ENST00000624251 2938 ntBASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLHC1Q8NHS4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 AL355994.2-201ENST00000447882 704 ntBASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 AC008825.2-201ENST00000603374 718 ntBASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 BAP1-211ENST00000615113 489 ntBASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 AL008718.2-201ENST00000609206 1313 ntBASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 CU639417.3-201ENST00000624240 1404 ntBASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.79□□□□□ -0.2
CLHC1Q8NHS4 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLHC1Q8NHS4 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLHC1Q8NHS4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.78□□□□□ -0.2
CLHC1Q8NHS4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.78□□□□□ -0.2
CLHC1Q8NHS4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms