Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AK2-208ENST00000487289 920 ntTSL 2 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 TLE2-205ENST00000586422 389 ntTSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 BAP1-211ENST00000615113 489 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 HSPA7-201ENST00000445535 1927 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AL031587.5-201ENST00000624344 1849 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AKR1C6P-201ENST00000432950 983 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AC010997.1-201ENST00000447646 350 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 RN7SL452P-201ENST00000482923 291 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 SAA2-206ENST00000530400 323 ntTSL 3 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 AC211476.2-201ENST00000608799 708 ntBASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC18.2■□□□□ 0.5
COL22A1Q8NFW1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 RPL13AP5-201ENST00000439189 612 ntBASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 BICD1P1-201ENST00000457832 1222 ntBASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 TBC1D3P1-201ENST00000590047 1693 ntBASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL22A1Q8NFW1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 OR52X1P-201ENST00000446117 914 ntBASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 AC009517.1-201ENST00000454750 570 ntBASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 CYP4F10P-201ENST00000589560 752 ntBASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 AC006273.1-201ENST00000606966 861 ntBASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 AC009779.7-201ENST00000609031 469 ntBASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 MIR6819-201ENST00000622122 61 ntBASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 AC010601.2-201ENST00000623060 774 ntBASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL22A1Q8NFW1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms