Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 CYP46A4P-201ENST00000414953 267 ntBASIC15.07■□□□□ 0
SCUBE3Q8IX30 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 AL512310.5-201ENST00000551999 515 ntBASIC15.07■□□□□ 0
SCUBE3Q8IX30 ACTG1P17-201ENST00000558391 1119 ntBASIC15.07■□□□□ 0
SCUBE3Q8IX30 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 AC091544.8-201ENST00000619490 361 ntBASIC15.07■□□□□ 0
SCUBE3Q8IX30 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 AC007952.5-201ENST00000572818 1486 ntBASIC15.07■□□□□ 0
SCUBE3Q8IX30 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 ACTG1P2-201ENST00000415776 1125 ntBASIC15.06■□□□□ 0
SCUBE3Q8IX30 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 AL008707.1-201ENST00000422498 534 ntBASIC15.06■□□□□ 0
SCUBE3Q8IX30 ACTG1P11-201ENST00000425411 1125 ntBASIC15.06■□□□□ 0
SCUBE3Q8IX30 AC005077.2-201ENST00000449786 690 ntBASIC15.06■□□□□ 0
SCUBE3Q8IX30 SPTLC1P5-201ENST00000450718 252 ntBASIC15.06■□□□□ 0
SCUBE3Q8IX30 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 MIR3188-201ENST00000583494 85 ntBASIC15.06■□□□□ 0
SCUBE3Q8IX30 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 LINC00115-201ENST00000473798 1317 ntBASIC15.06■□□□□ 0
SCUBE3Q8IX30 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 KRT8P24-201ENST00000560290 1559 ntBASIC15.06■□□□□ 0
SCUBE3Q8IX30 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.06■□□□□ 0
SCUBE3Q8IX30 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SCUBE3Q8IX30 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SCUBE3Q8IX30 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms