Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 AC009955.4-201ENST00000597192 544 ntBASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 BAP1-211ENST00000615113 489 ntBASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 AC008687.7-202ENST00000637404 953 ntBASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00346Q8IVM7 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.71□□□□□ -0.38
LINC00346Q8IVM7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 AC004899.2-201ENST00000622993 3860 ntBASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 AC104989.1-201ENST00000519711 778 ntBASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 AC100827.2-201ENST00000563214 1194 ntBASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 AC005962.1-201ENST00000584100 773 ntBASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 AC021016.3-201ENST00000608367 477 ntBASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 REXO1L6P-201ENST00000603433 1515 ntBASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00346Q8IVM7 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms