Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 POM121L14P-201ENST00000406100 1558 ntBASIC12.82□□□□□ -0.36
LRRC28Q86X40 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 MIR1909-201ENST00000411312 80 ntBASIC12.82□□□□□ -0.36
LRRC28Q86X40 KLF2P2-201ENST00000416807 1039 ntBASIC12.82□□□□□ -0.36
LRRC28Q86X40 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 AC136604.1-202ENST00000425471 771 ntBASIC12.82□□□□□ -0.36
LRRC28Q86X40 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 AC007551.1-201ENST00000457394 519 ntBASIC12.82□□□□□ -0.36
LRRC28Q86X40 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 AP005482.1-201ENST00000563722 1273 ntBASIC12.82□□□□□ -0.36
LRRC28Q86X40 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 DLX4-206ENST00000611342 1662 ntBASIC12.82□□□□□ -0.36
LRRC28Q86X40 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.82□□□□□ -0.36
LRRC28Q86X40 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.82□□□□□ -0.36
LRRC28Q86X40 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LRRC28Q86X40 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 AL136172.1-201ENST00000598590 1394 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 AL158070.2-201ENST00000623713 1621 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 MIR658-201ENST00000385210 100 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 AL391647.1-201ENST00000395664 511 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 AL139094.1-201ENST00000405549 1188 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRC28Q86X40 C2orf27AP3-201ENST00000434123 579 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 AC104989.1-201ENST00000519711 778 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 KRT18P8-201ENST00000581937 1246 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRC28Q86X40 AL354718.3-201ENST00000616414 581 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 AC132938.4-201ENST00000623835 848 ntBASIC12.81□□□□□ -0.36
LRRC28Q86X40 CR382287.1-201ENST00000623954 586 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms