Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 AL590824.1-201ENST00000403828 1349 ntBASIC12.97□□□□□ -0.33
ATG4DQ86TL0 LINC00115-201ENST00000473798 1317 ntBASIC12.97□□□□□ -0.33
ATG4DQ86TL0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 FNTAP2-201ENST00000430308 634 ntBASIC12.97□□□□□ -0.33
ATG4DQ86TL0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 NKAIN1P1-201ENST00000435754 582 ntBASIC12.97□□□□□ -0.33
ATG4DQ86TL0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 AC104073.2-201ENST00000453737 312 ntBASIC12.97□□□□□ -0.33
ATG4DQ86TL0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 AC044849.1-201ENST00000519737 1188 ntBASIC12.97□□□□□ -0.33
ATG4DQ86TL0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.97□□□□□ -0.33
ATG4DQ86TL0 SNORD3B-2-202ENST00000571722 791 ntBASIC12.97□□□□□ -0.33
ATG4DQ86TL0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.97□□□□□ -0.33
ATG4DQ86TL0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 DPM3-202ENST00000368399 517 ntBASIC12.96□□□□□ -0.33
ATG4DQ86TL0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 AC004898.1-201ENST00000451057 766 ntBASIC12.96□□□□□ -0.33
ATG4DQ86TL0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 AL021578.1-201ENST00000613646 709 ntBASIC12.96□□□□□ -0.33
ATG4DQ86TL0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATG4DQ86TL0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATG4DQ86TL0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms