Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 PPY2P-201ENST00000582808 702 ntBASIC9.61□□□□□ -0.87
SCXQ7RTU7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 AC097359.2-201ENST00000604992 2389 ntBASIC9.61□□□□□ -0.87
SCXQ7RTU7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SCXQ7RTU7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 CR383656.2-201ENST00000548656 2254 ntBASIC9.61□□□□□ -0.87
SCXQ7RTU7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SCXQ7RTU7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 CALR4P-201ENST00000431943 946 ntBASIC9.6□□□□□ -0.87
SCXQ7RTU7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 HSPB1P2-201ENST00000448722 546 ntBASIC9.6□□□□□ -0.87
SCXQ7RTU7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 AC091804.1-201ENST00000486888 567 ntBASIC9.6□□□□□ -0.87
SCXQ7RTU7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 SCARNA20.5-201ENST00000516991 142 ntBASIC9.6□□□□□ -0.87
SCXQ7RTU7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 AC020914.3-201ENST00000594712 304 ntBASIC9.6□□□□□ -0.87
SCXQ7RTU7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC9.6□□□□□ -0.87
SCXQ7RTU7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 PPT1-213ENST00000641319 2388 ntBASIC9.6□□□□□ -0.87
SCXQ7RTU7 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
SCXQ7RTU7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SCXQ7RTU7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SCXQ7RTU7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC9.59□□□□□ -0.87
SCXQ7RTU7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC9.59□□□□□ -0.87
SCXQ7RTU7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SCXQ7RTU7 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SCXQ7RTU7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SCXQ7RTU7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SCXQ7RTU7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
SCXQ7RTU7 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SCXQ7RTU7 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SCXQ7RTU7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms