Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 AC008741.2-201ENST00000612792 3115 ntBASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 SHMT1P1-201ENST00000419974 1312 ntBASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 AC087203.1-201ENST00000532111 1181 ntBASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 AL136982.5-201ENST00000605222 294 ntBASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 AC073869.4-201ENST00000620841 800 ntBASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 ENPP7P8-202ENST00000527856 1345 ntBASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD4Q5XG99 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AC097376.2-205ENST00000610159 5334 ntBASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 DBET-201ENST00000630918 3363 ntBASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 UROS-201ENST00000368774 744 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AC092570.1-201ENST00000414446 469 ntBASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms