Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
AP1S1P61966 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S1P61966 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S1P61966 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
AP1S1P61966 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S1P61966 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP1S1P61966 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S1P61966 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S1P61966 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S1P61966 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S1P61966 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S1P61966 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.36□□□□□ -0.11
AP1S1P61966 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.36□□□□□ -0.11
AP1S1P61966 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S1P61966 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
AP1S1P61966 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
AP1S1P61966 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
AP1S1P61966 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
AP1S1P61966 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
AP1S1P61966 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S1P61966 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
AP1S1P61966 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
AP1S1P61966 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 BX679664.3-201ENST00000414070 555 ntBASIC14.35□□□□□ -0.11
AP1S1P61966 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S1P61966 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.35□□□□□ -0.11
AP1S1P61966 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 AC113935.1-201ENST00000471722 555 ntBASIC14.35□□□□□ -0.11
AP1S1P61966 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 ALG1L13P-202ENST00000519320 584 ntBASIC14.35□□□□□ -0.11
AP1S1P61966 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 CHMP4BP1-201ENST00000556017 588 ntBASIC14.35□□□□□ -0.11
AP1S1P61966 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.35□□□□□ -0.11
AP1S1P61966 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.35□□□□□ -0.11
AP1S1P61966 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S1P61966 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S1P61966 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.35□□□□□ -0.11
AP1S1P61966 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
AP1S1P61966 AC097724.1-201ENST00000609581 426 ntBASIC14.35□□□□□ -0.11
AP1S1P61966 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.35□□□□□ -0.11
AP1S1P61966 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S1P61966 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
AP1S1P61966 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S1P61966 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S1P61966 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S1P61966 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S1P61966 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S1P61966 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.34□□□□□ -0.11
AP1S1P61966 TBC1D3J-201ENST00000620719 1426 ntBASIC14.34□□□□□ -0.11
AP1S1P61966 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S1P61966 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
AP1S1P61966 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S1P61966 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
AP1S1P61966 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S1P61966 AC073869.2-201ENST00000417338 1026 ntBASIC14.34□□□□□ -0.11
AP1S1P61966 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 DUTP3-201ENST00000450025 415 ntBASIC14.34□□□□□ -0.11
AP1S1P61966 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S1P61966 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S1P61966 RN7SL67P-201ENST00000492147 296 ntBASIC14.34□□□□□ -0.11
AP1S1P61966 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S1P61966 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S1P61966 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S1P61966 AC012044.1-201ENST00000603431 297 ntBASIC14.34□□□□□ -0.11
AP1S1P61966 AL021578.1-201ENST00000613646 709 ntBASIC14.34□□□□□ -0.11
AP1S1P61966 AC006453.1-201ENST00000636037 1257 ntBASIC14.34□□□□□ -0.11
AP1S1P61966 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms