Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.85□□□□□ -0.35
VBP1P61758 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VBP1P61758 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.85□□□□□ -0.35
VBP1P61758 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.85□□□□□ -0.35
VBP1P61758 AC145285.3-201ENST00000564603 959 ntBASIC12.85□□□□□ -0.35
VBP1P61758 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.85□□□□□ -0.35
VBP1P61758 AC105339.1-204ENST00000636249 355 ntBASIC12.85□□□□□ -0.35
VBP1P61758 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VBP1P61758 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 DRD5P1-201ENST00000456605 1438 ntBASIC12.85□□□□□ -0.35
VBP1P61758 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.85□□□□□ -0.35
VBP1P61758 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.85□□□□□ -0.35
VBP1P61758 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VBP1P61758 AC018445.4-201ENST00000624066 2291 ntBASIC12.85□□□□□ -0.35
VBP1P61758 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
VBP1P61758 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 CETN4P-206ENST00000642099 2168 ntBASIC12.84□□□□□ -0.35
VBP1P61758 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.84□□□□□ -0.35
VBP1P61758 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.84□□□□□ -0.35
VBP1P61758 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
VBP1P61758 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
VBP1P61758 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.84□□□□□ -0.35
VBP1P61758 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.84□□□□□ -0.35
VBP1P61758 AP001005.1-201ENST00000571755 1248 ntBASIC12.84□□□□□ -0.35
VBP1P61758 AC009955.4-201ENST00000597192 544 ntBASIC12.84□□□□□ -0.35
VBP1P61758 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 AC107373.2-201ENST00000607735 490 ntBASIC12.84□□□□□ -0.35
VBP1P61758 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 AL109936.8-201ENST00000641772 604 ntBASIC12.84□□□□□ -0.35
VBP1P61758 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.84□□□□□ -0.35
VBP1P61758 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VBP1P61758 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
VBP1P61758 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.84□□□□□ -0.35
VBP1P61758 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
VBP1P61758 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms